siRNA

Linked experiment: EXP001886

Linked peptide: Transportan

Linked paper: Trends in the Binding of Cell Penetrating Peptides to siRNA: A Molecular Docking Study (2017)

RNA overview

RNA Type: siRNA
Payload/target: GAPDH siRNA; HPV16 E6 siRNA (computational models)
Target gene/transcript: GAPDH

Sequence information

Sequence reported in source article: yes
RNA sequence: sense:GACGUAAACGGCCACAAGUUC; GCAACAGUUACUGCGACGUUU; antisense:ACUUGUGGCCGUUUACGUCGC; ACGUCGCAGUAACUGUUGCUU
Sense strand: GACGUAAACGGCCACAAGUUC; GCAACAGUUACUGCGACGUUU
Antisense strand: ACUUGUGGCCGUUUACGUCGC; ACGUCGCAGUAACUGUUGCUU

Chemical modifications

RNA modifications: Idealized A-form and B-form siRNA (modeled)